2025年-上海交通大学深部生命与资源研究院
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科学研究

2025年

发布:2026-09-03

1. Xiang Xiao*#, Weishu Zhao*#, Zewei Song#, Qi Qi#, Bo Wang#, Jiahui Zhu#, James Lin#, Jing Wang#, Aoran Hu#, Shanshan Huang#, Yinzhao Wang, Jianwei Chen, Chao Fang, Qianyue Ji, Nannan Zhang, Liang Meng, Xiaofeng Wei, Chuanxu Chen, Shanya Cai, Shun Chen, Kang Ding, Dong Li, Shuangquan Liu, Taoran Song, Liyang Tian, Haibin Zhang, Yu Zhang, Shiyu Xu, Jiayu Chen, Haixin Chen, Qian Cen, Fangfang Jiang, Guohai Hu, Chenguang Tang, Wu Guo, Xiaohan Wang, Liping Zhan, Jie Fan, Jun Wang, Changhao Zhou, Liuyang Li, Zhenbo Lv, Yaoxun Hu, Xiaonan Lin, Guoqiang Mai, Linlin Luo, Tao Yang, Weiwen Wang, Karsten Kristiansen, Liqun Chen, Huanming Yang, Ming Ni, Ying Gu, Feng Mu, Yunfeng Yang, Jizhong Zhou, Jian Wang, Wei-Jia Zhang*, Mo Han*, Xun Xu*, and Shanshan Liu*. Microbial ecosystems and ecological driving forces in the deepest ocean sediments. Cell, 2025, 188(5):1363-1377(共一共通讯)(IF: 45.1)(2025.3.6)(DOI: 10.1016/j.cell.2024.12.036)

 

2. Xiang Xiao*, Jian Wang, Kang Ding. MEER: Extraordinary flourishing ecosystem in the deepest ocean,Cell,2025,188(5): 1175-1177.(唯一一作唯一通讯)(IF:45.1)(2025.3.6)(DOI: 10.1016/j.cell.2024.12.037)

 

3. Mengrong Li#, Xiaoxia Chen#, Hongyu Qi, Qingxue Tang, Yongfeng Ye, Xiang Xiao, Weishu Zhao*, Liang Hong*, and Zhuo Liu*. Clustering intramolecular interactions of proteins significantly enhances cellular thermal stability. International Journal of Biological Macromolecules,2025,332:148690.(非一作非通讯)(IF:8.7)(2025.10.31)(DOI:10.1016/j.ijbiomac.2025.148690)

4. Xiangyu Wang, Yongxin Lv, Weishu Zhao, Xiang Xiao, Jing Wang*. D-amino acid metabolic versatility as a common adaptive strategy in the Mariana Trench microbiome. mSystems, 2025,10(8):1-22. (非一作非通讯)(IF:5.2)(2025.7.11)(DOI: 10.1128/msystems.00581-25)

5. Bingxin Zhou, Outongyi Lv, Jing Wang, Xiang Xiao, Weishu Zhao. ODNet: Opinion Dynamics-Inspired Neural Message Passing for Graphs and Hypergraphs. Transactions on Machine Learning Research,2025(非一作非通讯)(IF:无JCR影响因子)(2025.1.7)(无DOI)

6. 张良, 李明辰, 赵维殳, 肖湘, 洪亮*. 从序列到功能:蛋白质大语言模型的应用与发展. 生命科学, 2025, 37 (12): 1517-1533. (非一作非通讯)(2025.12.26)(DOI:10.13376/j.cbls/2025150)

7. Qianqian Song, Qun Jiang, Hongmei Jing, Xiang Xiao, Zhiyong Li*. Sediment depth–dependent fungal community and biogeochemical potentials along the abyssal–hadal transition zone ofthe Mariana Trench. Limnology and Oceanography,2025,70(11):3292-3308.(非一作非通讯)(IF:3.5)(2025.11)(DOI: 10.1002/lno.70212)

8. Yali Hao#, Mujie Zhang#, Xinjuan Lei, Chengrui Zhu, Taoliang Zhang, Yanping Zheng, Xiang Xiao, and Huahua Jian*. PSOSP uncovers pervasive SOS-independent prophages with distinct genomic and host traits in bacterial genome.iMeta,2025,4(5):e70073.(非一作非通讯)(IF:44.4)(2025.10)(DOI: 10.1002/imt2.70073)

9. Weiyi Li#, Qilian Fan#, Yi Yang, Xiang Xiao, Jing Li*, Yu Zhang*. Benchmarking and optimizing qualitative and quantitative pipelines in environmental metatranscriptomics using mixture controlling experiments. ISME Communications,2025,5(1):ycaf090.(非一作非通讯)(IF:6.4)(2025.5.29)(DOI:10.1093/ismeco/ycaf090)

10. Ting Yang, Mujie Zhang, Yi Yi, Yecheng Wang, Zhiwei Wang, Rui Zhang, Xiang Xiao, Huahua Jian*. Diversity and evolution of prokaryotic viral lytic proteins. ISME Journal, 2025, 19(1):wraf200.(非一作非通讯)(IF:10.2)(2025.10.8)( DOI: 10.1093/ismejo/wraf200)